NIFTI2Header (Xinapse Systems Medical Image A.P.I.)

java.lang.Object

com.xinapse.multisliceimage.analyze.ANZHeader

com.xinapse.multisliceimage.analyze.NIFTIHeader

com.xinapse.multisliceimage.analyze.NIFTI2Header

public class NIFTI2Header extends NIFTIHeader

This class represents a multi-dimensional NIFTI-2 image header file. The header file may either:

contain all the dimensional and descriptive information about a NIFTI-2 image, but none of the pixel data. This is like the Analyze 7.5 .img/.hdr file format.
contain both the dimensional and descriptive information about a NIFTI-2 image, and also the pixel data.

Field Summary

Fields inherited from class NIFTIHeader
DEFAULT_FSL_COMPATIBLE_NIFTI, DEFAULT_SAVE_FSL_ORIENT, DEFAULT_SAVE_SPM_ORIENT

Fields inherited from class ANZHeader
COMPRESSED_EXTENSION, COMPRESSED_UPPERCASE_EXTENSION, EXTENSION, MAXDIM, UPPERCASE_EXTENSION
Method Summary

Modifier and Type

Method

Description

void

setNCols(int nc)

Sets the number of columns in this NIFTI-2 image header.

void

setNFrames(int nF)

Sets the number of frames in this NIFTI-2 image header.

void

setNRows(int nr)

Sets the number of rows in this NIFTI-2 image header.

void

setNSlices(int ns)

Sets the number of slices in this NIFTI-2 image header.

Methods inherited from class NIFTIHeader
getFSLCompatibleNIFTI, getPreferredFSLCompatibleNIFTI, getPreferredSaveFSLOrient, getPreferredSaveSPMOrient, getSaveFSLOrient, getSaveSPMOrient, savePreferredFSLCompatibleNIFTI, savePreferredSaveFSLOrient, savePreferredSaveSPMOrient, setImageOrientationPositionPatient, toString, toString

Methods inherited from class ANZHeader
getDBName, getDescription, getMinMax, setDBName, setDims, setDims, setMinMax, setNCols, setNFrames, setNRows, setNSlices

Methods inherited from class Object
equals, getClass, hashCode, notify, notifyAll, wait, wait, wait

Method Details
- setNCols
  
  public void setNCols(int nc)
  
  Sets the number of columns in this NIFTI-2 image header. Warning! If this image header is associated with a set of pixel values in a NIFTI2Image, then manipulating the number of columns in this way will cause errors.
  
  Parameters:
  
  nc - the number of columns.
- setNRows
  
  public void setNRows(int nr)
  
  Sets the number of rows in this NIFTI-2 image header. Warning! If this image header is associated with a set of pixel values in a NIFTI2Image, then manipulating the number of rows in this way will cause errors.
  
  Parameters:
  
  nr - the number of rows.
- setNSlices
  
  public void setNSlices(int ns)
  
  Sets the number of slices in this NIFTI-2 image header. Warning! If this image header is associated with a set of pixel values into a NIFTI2Image, then manipulating the number of slices in this way will cause errors.
  
  Parameters:
  
  ns - the number of slices.
- setNFrames
  
  public void setNFrames(int nF)
  
  Sets the number of frames in this NIFTI-2 image header. Warning! If this image header is associated with a set of pixel values in a NIFTI2Image, then manipulating the number of frames in this way will cause errors.
  
  Parameters:
  
  nF - the number of frames.