AutoCordFinder - Usage

AutoCordFinder quasi-automatically outlines the spinal cord and calculates areas and volumes.

Running the program without any arguments produces the following output:

AutoCordFinder: ERROR: Missing required option: l1
Usage: AutoCordFinder [options] inputImage
 -?,--help                         Displays this help message.
 -c,--coeff <N>                    Sets the number of coefficients, N, used to
                                   define the cord outline shape (minimum: 1;
                                   maximum: 32; default: 12).
 -l1,--landmark1 <landmark-name>   Sets the landmark at which to start the cord
                                   area calculation. Must be one of
                                   "OPE","C2C3","C3C4","C4C5","C5C6","C6C7","C7T
                                   1","T1T2","T2T3","T3T4","T4T5".
 -l2,--landmark2 <landmark-name>   Sets the landmark at which to end the cord
                                   area calculation. Must be one of:
                                   "OPE","C2C3","C3C4","C4C5","C5C6","C6C7","C7T
                                   1","T1T2","T2T3","T3T4","T4T5".
 -P,--pdf                          Generates a PDF report.
 -t,--thickness <thickness>        Sets slice slab thickness if there is only
                                   one the landmark for selecting the cord
                                   region. The slab thickness must be an
                                   odd-integer number of mm.
 -tx,--txt                         Generates a text report.
 -v,--verbose                      Turns on verbose reporting to System.out.
 -ver,--version                    Prints the software build version, and exits.